arete: Automated REtrieval from TExt
A Python based pipeline for extraction of species occurrence data through the usage of large language models. Includes validation tools designed to handle model hallucinations for a scientific, rigorous use of LLM. Currently supports usage of GPT with more planned, including local and non-proprietary models. For more details on the methodology used please consult the references listed under each function, such as Kent, A. et al. (1995) <doi:10.1002/asi.5090060209>, van Rijsbergen, C.J. (1979, ISBN:978-0408709293, Levenshtein, V.I. (1966) <https://nymity.ch/sybilhunting/pdf/Levenshtein1966a.pdf> and Klaus Krippendorff (2011) <https://repository.upenn.edu/handle/20.500.14332/2089>.
| Version: |
0.1 |
| Depends: |
R (≥ 4.3.0) |
| Imports: |
terra, cld2, stringr, reticulate, pdftools, fedmatch, kableExtra, dplyr, gecko, methods, ggplot2, jsonlite, googledrive, irr, rmarkdown |
| Suggests: |
knitr |
| Published: |
2025-10-20 |
| DOI: |
10.32614/CRAN.package.arete (may not be active yet) |
| Author: |
Vasco V. Branco 
[cre, aut],
Vaughn Shirey
[ctb],
Thomas Merrien
[ctb],
Pedro Cardoso
[aut] |
| Maintainer: |
Vasco V. Branco <vasco.branco at helsinki.fi> |
| License: |
GPL-3 |
| NeedsCompilation: |
no |
| CRAN checks: |
arete results |
Documentation:
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