Last updated on 2025-05-12 06:50:33 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 2.0.0 | 10.44 | 519.14 | 529.58 | OK | |
| r-devel-linux-x86_64-debian-gcc | 2.0.0 | 5.95 | 310.67 | 316.62 | OK | |
| r-devel-linux-x86_64-fedora-clang | 2.0.0 | 678.35 | ERROR | |||
| r-devel-linux-x86_64-fedora-gcc | 2.0.0 | 786.79 | OK | |||
| r-devel-windows-x86_64 | 2.0.0 | 10.00 | 537.00 | 547.00 | OK | |
| r-patched-linux-x86_64 | 2.0.0 | 7.58 | 495.36 | 502.94 | OK | |
| r-release-linux-x86_64 | 2.0.0 | 10.58 | 502.59 | 513.17 | OK | |
| r-release-macos-arm64 | 2.0.0 | 253.00 | OK | |||
| r-release-macos-x86_64 | 2.0.0 | 463.00 | OK | |||
| r-release-windows-x86_64 | 2.0.0 | 12.00 | 459.00 | 471.00 | OK | |
| r-oldrel-macos-arm64 | 2.0.0 | 267.00 | NOTE | |||
| r-oldrel-macos-x86_64 | 2.0.0 | 329.00 | NOTE | |||
| r-oldrel-windows-x86_64 | 2.0.0 | 15.00 | 602.00 | 617.00 | NOTE |
Version: 2.0.0
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building ‘example-boltzman-wealth.Rmd’ using rmarkdown
*** caught segfault ***
address 0x7f8d69bfd9c8, cause 'memory not mapped'
Traceback:
1: vroom_write_(x, file, delim, eol, na_str = na, col_names = col_names, append = append, options = opts, num_threads = num_threads, progress = progress, buf_lines = buf_lines)
2: vroom::vroom_write(x, file, delim = delim, col_names = col_names, append = append, na = na, eol = eol, quote = quote, escape = escape, num_threads = num_threads, progress = progress)
3: write_delim(x, file, delim = ",", na = na, append = append, col_names = col_names, quote = quote, escape = escape, eol = eol, num_threads = num_threads, progress = progress)
4: readr::write_csv(state$resource_states, file = resources_path, na = "NA", append = append, col_names = col_names)
5: self$writer$write(village$current_state, village$name)
6: simulator$run_model()
7: eval(expr, envir)
8: eval(expr, envir)
9: withVisible(eval(expr, envir))
10: withCallingHandlers(code, message = function (cnd) { watcher$capture_plot_and_output() if (on_message$capture) { watcher$push(cnd) } if (on_message$silence) { invokeRestart("muffleMessage") }}, warning = function (cnd) { if (getOption("warn") >= 2 || getOption("warn") < 0) { return() } watcher$capture_plot_and_output() if (on_warning$capture) { cnd <- sanitize_call(cnd) watcher$push(cnd) } if (on_warning$silence) { invokeRestart("muffleWarning") }}, error = function (cnd) { watcher$capture_plot_and_output() cnd <- sanitize_call(cnd) watcher$push(cnd) switch(on_error, continue = invokeRestart("eval_continue"), stop = invokeRestart("eval_stop"), error = NULL)})
11: eval(call)
12: eval(call)
13: with_handlers({ for (expr in tle$exprs) { ev <- withVisible(eval(expr, envir)) watcher$capture_plot_and_output() watcher$print_value(ev$value, ev$visible, envir) } TRUE}, handlers)
14: doWithOneRestart(return(expr), restart)
15: withOneRestart(expr, restarts[[1L]])
16: withRestartList(expr, restarts[-nr])
17: doWithOneRestart(return(expr), restart)
18: withOneRestart(withRestartList(expr, restarts[-nr]), restarts[[nr]])
19: withRestartList(expr, restarts)
20: withRestarts(with_handlers({ for (expr in tle$exprs) { ev <- withVisible(eval(expr, envir)) watcher$capture_plot_and_output() watcher$print_value(ev$value, ev$visible, envir) } TRUE}, handlers), eval_continue = function() TRUE, eval_stop = function() FALSE)
21: evaluate::evaluate(...)
22: evaluate(code, envir = env, new_device = FALSE, keep_warning = if (is.numeric(options$warning)) TRUE else options$warning, keep_message = if (is.numeric(options$message)) TRUE else options$message, stop_on_error = if (is.numeric(options$error)) options$error else { if (options$error && options$include) 0L else 2L }, output_handler = knit_handlers(options$render, options))
23: in_dir(input_dir(), expr)
24: in_input_dir(evaluate(code, envir = env, new_device = FALSE, keep_warning = if (is.numeric(options$warning)) TRUE else options$warning, keep_message = if (is.numeric(options$message)) TRUE else options$message, stop_on_error = if (is.numeric(options$error)) options$error else { if (options$error && options$include) 0L else 2L }, output_handler = knit_handlers(options$render, options)))
25: eng_r(options)
26: block_exec(params)
27: call_block(x)
28: process_group(group)
29: withCallingHandlers(if (tangle) process_tangle(group) else process_group(group), error = function(e) { if (progress && is.function(pb$interrupt)) pb$interrupt() if (xfun::pkg_available("rlang", "1.0.0")) { if (is_R_CMD_build() || is_R_CMD_check()) { cnd = tryCatch(rlang::entrace(e), error = identity) error <<- format(cnd) } else { rlang::entrace(e) } } })
30: xfun:::handle_error(withCallingHandlers(if (tangle) process_tangle(group) else process_group(group), error = function(e) { if (progress && is.function(pb$interrupt)) pb$interrupt() if (xfun::pkg_available("rlang", "1.0.0")) { if (is_R_CMD_build() || is_R_CMD_check()) { cnd = tryCatch(rlang::entrace(e), error = identity) error <<- format(cnd) } else { rlang::entrace(e) } } }), function(loc) { setwd(wd) write_utf8(res, output %n% stdout()) paste0("\nQuitting from ", loc, if (!is.null(error)) paste0("\n", rule(), error, "\n", rule()))}, if (labels[i] != "") sprintf(" [%s]", labels[i]), get_loc)
31: process_file(text, output)
32: knitr::knit(knit_input, knit_output, envir = envir, quiet = quiet)
33: rmarkdown::render(file, encoding = encoding, quiet = quiet, envir = globalenv(), output_dir = getwd(), ...)
34: vweave_rmarkdown(...)
35: engine$weave(file, quiet = quiet, encoding = enc)
36: doTryCatch(return(expr), name, parentenv, handler)
37: tryCatchOne(expr, names, parentenv, handlers[[1L]])
38: tryCatchList(expr, classes, parentenv, handlers)
39: tryCatch({ engine$weave(file, quiet = quiet, encoding = enc) setwd(startdir) output <- find_vignette_product(name, by = "weave", engine = engine) if (!have.makefile && vignette_is_tex(output)) { texi2pdf(file = output, clean = FALSE, quiet = quiet) output <- find_vignette_product(name, by = "texi2pdf", engine = engine) }}, error = function(e) { OK <<- FALSE message(gettextf("Error: processing vignette '%s' failed with diagnostics:\n%s", file, conditionMessage(e)))})
40: tools:::.buildOneVignette("example-boltzman-wealth.Rmd", "/data/gannet/ripley/R/packages/tests-clang/villager.Rcheck/vign_test/villager", TRUE, FALSE, "example-boltzman-wealth", "UTF-8", "/tmp/Rtmpv8ZR0f/working_dir/Rtmpwl1bTb/file3493b649e98ab6.rds")
An irrecoverable exception occurred. R is aborting now ...
--- re-building ‘extending-agents.Rmd’ using rmarkdown
--- finished re-building ‘extending-agents.Rmd’
--- re-building ‘extending-resources.Rmd’ using rmarkdown
--- finished re-building ‘extending-resources.Rmd’
SUMMARY: processing the following file failed:
‘example-boltzman-wealth.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 2.0.0
Check: installed package size
Result: NOTE
installed size is 5.2Mb
sub-directories of 1Mb or more:
doc 4.7Mb
Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64