Last updated on 2026-04-23 02:55:16 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 15.18 | 301.85 | 317.03 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 11.43 | 267.11 | 278.54 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 23.00 | 300.78 | 323.78 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 32.00 | 341.93 | 373.93 | OK | |
| r-devel-macos-arm64 | 1.1.4 | 4.00 | 46.00 | 50.00 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 20.00 | 195.00 | 215.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 14.55 | 345.71 | 360.26 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 14.20 | 334.90 | 349.10 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 13.00 | 529.00 | 542.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 20.00 | 199.00 | 219.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 11.00 | 443.00 | 454.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 25.00 | 248.00 | 273.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [114s/462s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.763, system: 0.101, elapsed: 2.798 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.064, system: 0.312, elapsed: 13.479 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.240, system: 0.036, elapsed: 0.516 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.878, system: 1.310, elapsed: 82.277 seconds]
Computing values for grid cells...
... done. [user: 0.186, system: 0.010, elapsed: 0.394 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.761, system: 1.933, elapsed: 101.018 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.646, system: 0.065, elapsed: 4.086 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.942, system: 0.176, elapsed: 24.816 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.233, system: 0.028, elapsed: 1.234 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 8.065, system: 1.385, elapsed: 106.993 seconds]
Computing values for grid cells...
... done. [user: 0.174, system: 0.007, elapsed: 0.178 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.698, system: 1.796, elapsed: 138.879 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.764, system: 0.099, elapsed: 3.832 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.360, system: 0.347, elapsed: 20.527 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.223, system: 0.025, elapsed: 0.959 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.649, system: 1.145, elapsed: 87.007 seconds]
Computing values for grid cells...
... done. [user: 0.197, system: 0.018, elapsed: 0.377 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
2 1 4 3
... computing probabilities from permuted values ...
... done. [user: 1.411, system: 0.387, elapsed: 1.647 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 22.374, system: 2.276, elapsed: 116.219 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.735, system: 0.082, elapsed: 2.508 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.132, system: 0.257, elapsed: 16.521 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.253, system: 0.031, elapsed: 0.317 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.413, system: 1.142, elapsed: 41.758 seconds]
Computing values for grid cells...
... done. [user: 0.192, system: 0.012, elapsed: 0.407 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 13.653, system: 1.413, elapsed: 31.310 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 34.168, system: 3.101, elapsed: 94.505 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [107s/382s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.709, system: 0.078, elapsed: 1.984 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.823, system: 0.274, elapsed: 14.065 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.227, system: 0.026, elapsed: 0.338 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.205, system: 0.978, elapsed: 18.472 seconds]
Computing values for grid cells...
... done. [user: 0.177, system: 0.009, elapsed: 0.244 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.741, system: 1.404, elapsed: 35.976 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.797, system: 0.096, elapsed: 2.465 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.747, system: 0.297, elapsed: 13.926 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.254, system: 0.031, elapsed: 0.319 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.143, system: 0.978, elapsed: 69.773 seconds]
Computing values for grid cells...
... done. [user: 0.190, system: 0.012, elapsed: 0.577 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.767, system: 1.470, elapsed: 88.097 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.719, system: 0.068, elapsed: 5.211 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.747, system: 0.216, elapsed: 26.289 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.229, system: 0.026, elapsed: 1.228 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.344, system: 1.250, elapsed: 105.854 seconds]
Computing values for grid cells...
... done. [user: 0.180, system: 0.010, elapsed: 0.187 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.207, system: 0.312, elapsed: 2.242 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 21.262, system: 2.244, elapsed: 143.525 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.615, system: 0.063, elapsed: 2.269 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.698, system: 0.200, elapsed: 15.615 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.244, system: 0.025, elapsed: 0.279 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 8.304, system: 1.069, elapsed: 42.505 seconds]
Computing values for grid cells...
... done. [user: 0.171, system: 0.009, elapsed: 0.296 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.769, system: 0.814, elapsed: 43.178 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 32.614, system: 2.251, elapsed: 105.168 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64