Last updated on 2026-04-22 22:58:29 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 15.18 | 301.85 | 317.03 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 11.43 | 267.11 | 278.54 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 23.00 | 300.78 | 323.78 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 32.00 | 341.93 | 373.93 | OK | |
| r-devel-macos-arm64 | 1.1.4 | 4.00 | 46.00 | 50.00 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 20.00 | 195.00 | 215.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 16.58 | 333.20 | 349.78 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 14.20 | 334.90 | 349.10 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 13.00 | 477.00 | 490.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 20.00 | 199.00 | 219.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 11.00 | 514.00 | 525.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 25.00 | 248.00 | 273.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [107s/409s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.654, system: 0.074, elapsed: 3.083 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.710, system: 0.229, elapsed: 16.892 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.211, system: 0.022, elapsed: 0.359 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.559, system: 1.221, elapsed: 88.001 seconds]
Computing values for grid cells...
... done. [user: 0.181, system: 0.014, elapsed: 0.431 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.964, system: 1.716, elapsed: 110.207 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.801, system: 0.088, elapsed: 4.525 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.717, system: 0.169, elapsed: 15.956 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.221, system: 0.023, elapsed: 1.027 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.190, system: 0.972, elapsed: 55.670 seconds]
Computing values for grid cells...
... done. [user: 0.204, system: 0.018, elapsed: 0.418 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.764, system: 1.389, elapsed: 78.990 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.590, system: 0.049, elapsed: 2.621 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.872, system: 0.235, elapsed: 17.959 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.222, system: 0.029, elapsed: 1.006 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.995, system: 0.918, elapsed: 39.667 seconds]
Computing values for grid cells...
... done. [user: 0.197, system: 0.010, elapsed: 0.364 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.403, system: 0.371, elapsed: 1.556 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 21.051, system: 1.783, elapsed: 64.534 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.641, system: 0.046, elapsed: 2.731 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.858, system: 0.208, elapsed: 13.369 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.221, system: 0.019, elapsed: 0.398 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.592, system: 1.118, elapsed: 78.526 seconds]
Computing values for grid cells...
... done. [user: 0.183, system: 0.012, elapsed: 0.337 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 12.416, system: 1.234, elapsed: 45.970 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 32.660, system: 2.778, elapsed: 142.800 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [108s/455s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.702, system: 0.075, elapsed: 2.703 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.575, system: 0.155, elapsed: 13.426 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.230, system: 0.031, elapsed: 0.567 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.991, system: 0.891, elapsed: 22.647 seconds]
Computing values for grid cells...
... done. [user: 0.157, system: 0.002, elapsed: 0.163 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.301, system: 1.198, elapsed: 40.350 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.598, system: 0.046, elapsed: 1.913 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.582, system: 0.169, elapsed: 11.936 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.280, system: 0.029, elapsed: 0.251 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.978, system: 1.102, elapsed: 8.696 seconds]
Computing values for grid cells...
... done. [user: 0.175, system: 0.010, elapsed: 0.226 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.337, system: 1.407, elapsed: 23.703 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.697, system: 0.068, elapsed: 3.244 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.705, system: 0.192, elapsed: 17.183 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.215, system: 0.022, elapsed: 1.113 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.638, system: 2.204, elapsed: 166.637 seconds]
Computing values for grid cells...
... done. [user: 0.195, system: 0.017, elapsed: 0.501 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.328, system: 0.350, elapsed: 2.347 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 21.536, system: 3.026, elapsed: 192.573 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.745, system: 0.103, elapsed: 4.602 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.825, system: 0.147, elapsed: 20.700 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.226, system: 0.028, elapsed: 1.116 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.429, system: 1.585, elapsed: 110.805 seconds]
Computing values for grid cells...
... done. [user: 0.178, system: 0.013, elapsed: 0.680 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 12.233, system: 0.991, elapsed: 48.394 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 32.422, system: 3.081, elapsed: 189.004 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64