Last updated on 2025-07-09 13:51:23 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 13.67 | 236.91 | 250.58 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 11.25 | 203.87 | 215.12 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 335.93 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 383.96 | OK | |||
| r-devel-windows-x86_64 | 1.1.3 | 19.00 | 159.00 | 178.00 | OK | |
| r-patched-linux-x86_64 | 1.1.3 | 15.52 | 236.32 | 251.84 | OK | |
| r-release-linux-x86_64 | 1.1.3 | 14.35 | 218.61 | 232.96 | OK | |
| r-release-macos-arm64 | 1.0.5 | 41.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 174.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 184.00 | 205.00 | OK | |
| r-oldrel-macos-arm64 | 1.0.5 | 36.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 156.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 236.00 | 260.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [78s/119s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.446, system: 0.038, elapsed: 1.729 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.851, system: 0.132, elapsed: 11.241 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.178, system: 0.013, elapsed: 0.197 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.655, system: 0.182, elapsed: 4.939 seconds]
Computing values for grid cells...
... done. [user: 0.165, system: 0.005, elapsed: 0.282 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.821, system: 0.393, elapsed: 19.004 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.471, system: 0.031, elapsed: 1.987 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.913, system: 0.085, elapsed: 11.967 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.011, elapsed: 0.305 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.737, system: 0.172, elapsed: 6.554 seconds]
Computing values for grid cells...
... done. [user: 0.160, system: 0.003, elapsed: 0.226 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.004, system: 0.323, elapsed: 21.841 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.550, system: 0.037, elapsed: 2.423 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.012, system: 0.082, elapsed: 15.463 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.012, elapsed: 0.295 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.685, system: 0.180, elapsed: 6.131 seconds]
Computing values for grid cells...
... done. [user: 0.160, system: 0.003, elapsed: 0.235 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.144, system: 0.221, elapsed: 1.091 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.356, system: 0.557, elapsed: 26.564 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.472, system: 0.028, elapsed: 2.387 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.972, system: 0.077, elapsed: 13.204 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.188, system: 0.011, elapsed: 0.316 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.641, system: 0.174, elapsed: 5.264 seconds]
Computing values for grid cells...
... done. [user: 0.157, system: 0.003, elapsed: 0.191 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.197, system: 0.458, elapsed: 21.253 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.281, system: 0.782, elapsed: 43.659 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [77s/105s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.500, system: 0.039, elapsed: 1.704 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.887, system: 0.074, elapsed: 13.402 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.184, system: 0.014, elapsed: 0.353 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.531, system: 0.179, elapsed: 5.558 seconds]
Computing values for grid cells...
... done. [user: 0.157, system: 0.004, elapsed: 0.239 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.797, system: 0.331, elapsed: 22.006 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.522, system: 0.034, elapsed: 2.411 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.872, system: 0.069, elapsed: 12.783 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.189, system: 0.013, elapsed: 0.282 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.494, system: 0.174, elapsed: 4.517 seconds]
Computing values for grid cells...
... done. [user: 0.156, system: 0.004, elapsed: 0.198 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.764, system: 0.313, elapsed: 21.029 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.565, system: 0.033, elapsed: 2.046 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.833, system: 0.061, elapsed: 12.798 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.011, elapsed: 0.238 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.467, system: 0.149, elapsed: 4.580 seconds]
Computing values for grid cells...
... done. [user: 0.166, system: 0.003, elapsed: 0.204 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.047, system: 0.234, elapsed: 0.890 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.884, system: 0.513, elapsed: 21.566 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.489, system: 0.030, elapsed: 2.186 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.898, system: 0.062, elapsed: 12.807 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.182, system: 0.011, elapsed: 0.225 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.494, system: 0.196, elapsed: 4.886 seconds]
Computing values for grid cells...
... done. [user: 0.171, system: 0.008, elapsed: 0.231 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.127, system: 0.569, elapsed: 13.398 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 24.985, system: 0.898, elapsed: 34.573 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64