Last updated on 2025-07-31 20:50:31 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 12.58 | 252.26 | 264.84 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.53 | 231.63 | 242.16 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 306.52 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 369.96 | OK | |||
| r-devel-windows-x86_64 | 1.1.4 | 20.00 | 189.00 | 209.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 13.84 | 266.70 | 280.54 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 14.10 | 257.90 | 272.00 | OK | |
| r-release-macos-arm64 | 1.1.4 | 102.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 159.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 20.00 | 205.00 | 225.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 98.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 162.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 281.00 | 305.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [79s/107s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.493, system: 0.040, elapsed: 2.443 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.074, system: 0.074, elapsed: 12.118 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.015, elapsed: 0.288 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.678, system: 0.189, elapsed: 5.068 seconds]
Computing values for grid cells...
... done. [user: 0.165, system: 0.004, elapsed: 0.283 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.129, system: 0.343, elapsed: 21.086 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.489, system: 0.033, elapsed: 2.158 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.081, system: 0.081, elapsed: 12.398 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.188, system: 0.013, elapsed: 0.438 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.618, system: 0.159, elapsed: 5.193 seconds]
Computing values for grid cells...
... done. [user: 0.158, system: 0.004, elapsed: 0.212 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.071, system: 0.309, elapsed: 21.152 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.507, system: 0.027, elapsed: 2.113 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.037, system: 0.079, elapsed: 10.922 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.195, system: 0.011, elapsed: 0.281 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.741, system: 0.184, elapsed: 5.615 seconds]
Computing values for grid cells...
... done. [user: 0.155, system: 0.004, elapsed: 0.190 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.114, system: 0.225, elapsed: 0.909 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.391, system: 0.549, elapsed: 20.949 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.437, system: 0.035, elapsed: 1.927 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.185, system: 0.160, elapsed: 12.979 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.188, system: 0.015, elapsed: 0.302 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.695, system: 0.220, elapsed: 5.759 seconds]
Computing values for grid cells...
... done. [user: 0.167, system: 0.006, elapsed: 0.261 seconds]
Starting 50 permutations...
... serially ...
|
| | 0%
|
|== | 2%
|
|=== | 4%
|
|===== | 6%
|
|====== | 8%
|
|======== | 10%
|
|========== | 12%
|
|=========== | 14%
|
|============= | 16%
|
|============== | 18%
|
|================ | 20%
|
|================== | 22%
|
|=================== | 24%
|
|===================== | 26%
|
|====================== | 28%
|
|======================== | 30%
|
|========================== | 32%
|
|=========================== | 34%
|
|============================= | 36%
|
|============================== | 38%
|
|================================ | 40%
|
|================================== | 42%
|
|=================================== | 44%
|
|===================================== | 46%
|
|====================================== | 48%
|
|======================================== | 50%
|
|========================================== | 52%
|
|=========================================== | 54%
|
|============================================= | 56%
|
|============================================== | 58%
|
|================================================ | 60%
|
|================================================== | 62%
|
|=================================================== | 64%
|
|===================================================== | 66%
|
|====================================================== | 68%
|
|======================================================== | 70%
|
|========================================================== | 72%
|
|=========================================================== | 74%
|
|============================================================= | 76%
|
|============================================================== | 78%
|
|================================================================ | 80%
|
|================================================================== | 82%
|
|=================================================================== | 84%
|
|===================================================================== | 86%
|
|====================================================================== | 88%
|
|======================================================================== | 90%
|
|========================================================================== | 92%
|
|=========================================================================== | 94%
|
|============================================================================= | 96%
|
|============================================================================== | 98%
|
|================================================================================| 100%
... computing probabilities from permuted values ...
... done. [user: 10.164, system: 0.477, elapsed: 14.741 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.493, system: 0.953, elapsed: 36.942 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [78s/110s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.575, system: 0.056, elapsed: 2.014 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.813, system: 0.059, elapsed: 9.522 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.187, system: 0.013, elapsed: 0.210 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.550, system: 0.187, elapsed: 6.917 seconds]
Computing values for grid cells...
... done. [user: 0.166, system: 0.005, elapsed: 0.458 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.844, system: 0.344, elapsed: 19.920 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.554, system: 0.043, elapsed: 3.944 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.158, system: 0.122, elapsed: 19.814 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.183, system: 0.013, elapsed: 0.274 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.745, system: 0.216, elapsed: 6.783 seconds]
Computing values for grid cells...
... done. [user: 0.172, system: 0.007, elapsed: 0.285 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.352, system: 0.430, elapsed: 32.210 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.553, system: 0.031, elapsed: 2.308 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.999, system: 0.073, elapsed: 10.871 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.188, system: 0.011, elapsed: 0.253 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.470, system: 0.156, elapsed: 4.325 seconds]
Computing values for grid cells...
... done. [user: 0.162, system: 0.003, elapsed: 0.172 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.057, system: 0.214, elapsed: 0.944 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.064, system: 0.526, elapsed: 19.760 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.517, system: 0.034, elapsed: 1.893 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.046, system: 0.067, elapsed: 10.443 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.190, system: 0.011, elapsed: 0.264 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.539, system: 0.160, elapsed: 5.211 seconds]
Computing values for grid cells...
... done. [user: 0.162, system: 0.003, elapsed: 0.217 seconds]
Starting 50 permutations...
... serially ...
|
| | 0%
|
|== | 2%
|
|=== | 4%
|
|===== | 6%
|
|====== | 8%
|
|======== | 10%
|
|========== | 12%
|
|=========== | 14%
|
|============= | 16%
|
|============== | 18%
|
|================ | 20%
|
|================== | 22%
|
|=================== | 24%
|
|===================== | 26%
|
|====================== | 28%
|
|======================== | 30%
|
|========================== | 32%
|
|=========================== | 34%
|
|============================= | 36%
|
|============================== | 38%
|
|================================ | 40%
|
|================================== | 42%
|
|=================================== | 44%
|
|===================================== | 46%
|
|====================================== | 48%
|
|======================================== | 50%
|
|========================================== | 52%
|
|=========================================== | 54%
|
|============================================= | 56%
|
|============================================== | 58%
|
|================================================ | 60%
|
|================================================== | 62%
|
|=================================================== | 64%
|
|===================================================== | 66%
|
|====================================================== | 68%
|
|======================================================== | 70%
|
|========================================================== | 72%
|
|=========================================================== | 74%
|
|============================================================= | 76%
|
|============================================================== | 78%
|
|================================================================ | 80%
|
|================================================================== | 82%
|
|=================================================================== | 84%
|
|===================================================================== | 86%
|
|====================================================================== | 88%
|
|======================================================================== | 90%
|
|========================================================================== | 92%
|
|=========================================================================== | 94%
|
|============================================================================= | 96%
|
|============================================================================== | 98%
|
|================================================================================| 100%
... computing probabilities from permuted values ...
... done. [user: 9.941, system: 0.436, elapsed: 12.185 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.028, system: 0.741, elapsed: 31.078 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64