A B C D E G H I K M N O P R S T U V W
| AddInfoLine | Functions to Manipulate HYPE Info Files | 
| AllDownstreamSubids | Find All Downstream SUBIDs | 
| AllSimToPar | HYPE Calibration Outputs to par.txt | 
| AllUpstreamSubids | Find All Upstream SUBIDs | 
| AnnualRegime | Calculate annual regimes | 
| BarplotUpstreamClasses | Bar plots of upstream-averaged classes of HYPE sub-basins | 
| BestSimsToPar | HYPE Calibration Outputs to par.txt | 
| BoxplotSLCClasses | Box plots of SLC distributions | 
| CleanSLCClasses | Clean Soil-Landuse classes (SLCs) from small fractions | 
| ColBlues | Custom color ramp palettes | 
| ColDiffGeneric | Custom color ramp palettes | 
| ColDiffTemp | Custom color ramp palettes | 
| ColGreens | Custom color ramp palettes | 
| ColNitr | Custom color ramp palettes | 
| ColPhos | Custom color ramp palettes | 
| ColPrec | Custom color ramp palettes | 
| ColPurples | Custom color ramp palettes | 
| ColQ | Custom color ramp palettes | 
| ColReds | Custom color ramp palettes | 
| ColTemp | Custom color ramp palettes | 
| ColYOB | Custom color ramp palettes | 
| CompareFiles | Compare HYPE model files to identify any differences. | 
| ConvertDischarge | Calculate Specific runoff from volumetric discharge and vice versa | 
| CreateOptpar | Create an optpar list | 
| CustomColors | Custom color ramp palettes | 
| datetime | Quickly query and set HYPE-specific attributes | 
| datetime<- | Quickly query and set HYPE-specific attributes | 
| DirectUpstreamSubids | Find Direct Upstream SUBIDs, with Flow Fractions | 
| distinctColorPalette | Generate optimally distinct color palettes | 
| EquallySpacedObs | Create an equally spaced time series from irregular observations | 
| ExtractFreq | Extract quantiles for use in a frequency distribution plot, e.g. a flow duration curve | 
| ExtractStats | Extract statistics from time series | 
| GOF | Goodness of Fit Functions | 
| gof | Goodness of Fit Functions | 
| gof.default | Goodness of Fit Functions | 
| GroupSLCClasses | Calculate grouped sums for SLC classes in a GeoData file | 
| GwRetention | Calculate groundwater retention of nutrients | 
| HeadwaterSubids | Find all headwater SUBIDs of a model domain | 
| HypeAttrAccess | Quickly query and set HYPE-specific attributes | 
| HypeDataExport | Write HYPE data files | 
| HypeDataImport | Read HYPE data files | 
| HypeGeoData | HypeGeoData data frames | 
| HypeMultiVar | HypeMultiVar arrays | 
| HypeSingleVar | HypeSingleVar arrays | 
| HypeSubidChecks | Check HYPE SUBID properties | 
| hypeunit | Quickly query and set HYPE-specific attributes | 
| hypeunit<- | Quickly query and set HYPE-specific attributes | 
| HypeXobs | HypeXobs data frames | 
| InfoManipulation | Functions to Manipulate HYPE Info Files | 
| IsHeadwater | Check HYPE SUBID properties | 
| IsOutlet | Check HYPE SUBID properties | 
| IsRegulated | Check HYPE SUBID properties | 
| KGE | Goodness of Fit Functions | 
| KGE.default | Goodness of Fit Functions | 
| mae | Goodness of Fit Functions | 
| mae.default | Goodness of Fit Functions | 
| MapRegionalSources | Map regional irrigation source connection as spatial lines | 
| merge | Merge HypeGeoData object | 
| merge.HypeGeoData | Merge HypeGeoData object | 
| MergeObs | Merge two HYPE observation data frames | 
| MergeXobs | Merge two Xobs data frames | 
| NSE | Goodness of Fit Functions | 
| NSE.default | Goodness of Fit Functions | 
| NSE.HypeSingleVar | Nash-Sutcliffe Efficiency | 
| obsid | Quickly query and set HYPE-specific attributes | 
| obsid<- | Quickly query and set HYPE-specific attributes | 
| OptimisedClasses | Get optimized classes from an imported optpar.txt file | 
| OptimizedClasses | Get optimized classes from an imported optpar.txt file | 
| OutletIds | Find Outlet IDs | 
| OutletNearObs | Find outlet-near observations in HYPE observation data files. | 
| OutletSubids | Find all Outlet SUBIDs of a model domain | 
| outregid | Quickly query and set HYPE-specific attributes | 
| outregid<- | Quickly query and set HYPE-specific attributes | 
| PartyParrot | Create a Party Parrot. | 
| pbias | Goodness of Fit Functions | 
| pbias.default | Goodness of Fit Functions | 
| pbias.HypeSingleVar | Percent bias | 
| PlotAnnualRegime | Plot annual regimes | 
| PlotBasinOutput | Plot a suite of time series plots from a HYPE basin output file | 
| PlotBasinSummary | Plot a summary of model results for a single sub-basin | 
| PlotDurationCurve | Plot duration curves | 
| PlotJohan | Plot model performance by SUBID attributes | 
| PlotMapOutput | Plot function for HYPE map results. | 
| PlotMapPoints | Plot function for mapped point information | 
| PlotPerformanceByAttribute | Plot model performance by SUBID attributes | 
| PlotSimObsRegime | Plot annual regimes of simulated and observed variables | 
| PlotSubbasinRouting | Plot HYPE model subbasin routing. | 
| r | Pearson product-moment correlation coefficient r | 
| r.HypeSingleVar | Pearson product-moment correlation coefficient r | 
| ReadAllsim | Read HYPE data files | 
| ReadAquiferData | Read HYPE data files | 
| ReadBasinOutput | Read a Basin Output File | 
| ReadBranchData | Read HYPE data files | 
| ReadClassData | Read a 'ClassData.txt' File | 
| ReadCropData | Read HYPE data files | 
| ReadDamData | Read HYPE data files | 
| ReadDescription | Read a 'description.txt' file | 
| ReadFloodData | Read HYPE data files | 
| ReadForcKey | Read HYPE data files | 
| ReadGeoClass | Read a 'GeoClass.txt' File | 
| ReadGeoData | Read a 'GeoData.txt' file | 
| ReadGlacierData | Read HYPE data files | 
| ReadInfo | Read an 'info.txt' file | 
| ReadLakeData | Read HYPE data files | 
| ReadMapOutput | Read a Map Output File | 
| ReadMgmtData | Read HYPE data files | 
| ReadObs | Read HYPE observation data files | 
| ReadOptpar | Read an 'optpar.txt' file | 
| ReadOutregions | Read HYPE data files | 
| ReadPar | Read a 'par.txt' file | 
| ReadPmsf | Read a 'pmsf.txt' file | 
| ReadPointSourceData | Read HYPE data files | 
| ReadPTQobs | Read HYPE observation data files | 
| ReadSimass | Read a 'simass.txt' file | 
| ReadSubass | Read a 'subassX.txt' file | 
| ReadTimeOutput | Read a Time Output File | 
| ReadUpdate | Read HYPE data files | 
| ReadWsOutput | Read optimization simulation results | 
| ReadXobs | Read an 'Xobs.txt' file | 
| RemoveInfoLine | Functions to Manipulate HYPE Info Files | 
| RescaleSLCClasses | Re-scale SLC classes in a GeoData data frame | 
| rPearson | Goodness of Fit Functions | 
| rPearson.default | Goodness of Fit Functions | 
| RunHYPE | Run HYPE model | 
| ScaleAquiferData | Scale 'AquiferData.txt' files to different model time steps | 
| ScaleFloodData | Scale 'FloodData.txt' files to different model time steps | 
| ScalePar | Scale 'par.txt' files to different model time step | 
| SimToPar | HYPE Calibration Outputs to par.txt | 
| sKGE | Goodness of Fit Functions | 
| sKGE.default | Goodness of Fit Functions | 
| SortGeoData | Sort a GeoData dataframe in downstream order | 
| subid | Quickly query and set HYPE-specific attributes | 
| subid<- | Quickly query and set HYPE-specific attributes | 
| SubidAttributeSummary | Summarize subbasin attributes | 
| SumSLCClasses | Calculate sums of SLC classes in a GeoData file | 
| SumUpstreamArea | Calculate upstream area sums | 
| timestep | Quickly query and set HYPE-specific attributes | 
| timestep<- | Quickly query and set HYPE-specific attributes | 
| UpstreamGeoData | Calculate upstream sums and averages of selected GeoData contents | 
| UpstreamGroupSLCClasses | Calculate area-weighted upstream averages of grouped SLC class fractions. | 
| UpstreamPointSources | Summarize point source emissions of all upstream areas | 
| UpstreamSLCClasses | Calculate SLC class fractions of all upstream areas | 
| valindex | Goodness of Fit Functions | 
| valindex.default | Goodness of Fit Functions | 
| variable | Quickly query and set HYPE-specific attributes | 
| variable<- | Quickly query and set HYPE-specific attributes | 
| VariableInfo | Lookup Functions For HYPE Variables | 
| VariableLookup | Lookup Functions For HYPE Variables | 
| VariableSearch | Lookup Functions For HYPE Variables | 
| VE | Goodness of Fit Functions | 
| VE.default | Goodness of Fit Functions | 
| VisualiseMapOutput | Shiny App for visualizing HYPE MapOutputs. | 
| VisualiseMapPoints | Shiny App for visualizing Mapped Point Information. | 
| VisualizeMapOutput | Shiny App for visualizing HYPE MapOutputs. | 
| VisualizeMapPoints | Shiny App for visualizing Mapped Point Information. | 
| WriteAquiferData | Write HYPE data files | 
| WriteBasinOutput | Write a basin output '[SUBID].txt' file | 
| WriteBranchData | Write HYPE data files | 
| WriteCropData | Write HYPE data files | 
| WriteDamData | Write HYPE data files | 
| WriteFloodData | Write HYPE data files | 
| WriteForcKey | Write HYPE data files | 
| WriteGeoClass | Write a 'GeoClass.txt' file | 
| WriteGeoData | Write a 'GeoData.txt' file | 
| WriteGlacierData | Write HYPE data files | 
| WriteHarmonizedData | Write a Harmonized Data File | 
| WriteHarmonizedSpatialDescription | Write a Harmonized Spatial Description File | 
| WriteInfo | Write a 'info.txt' File | 
| WriteLakeData | Write HYPE data files | 
| WriteMapOutput | Write a 'mapXXXX.txt' file | 
| WriteMgmtData | Write HYPE data files | 
| WriteObs | Write 'Pobs.txt', 'Tobs.txt', 'Qobs.txt', and other observation data files | 
| WriteOptpar | Write an 'optpar.txt' File | 
| WriteOutregions | Write HYPE data files | 
| WritePar | Write a 'par.txt' File | 
| WritePmsf | Write a 'pmsf.txt' file | 
| WritePointSourceData | Write HYPE data files | 
| WritePTQobs | Write 'Pobs.txt', 'Tobs.txt', 'Qobs.txt', and other observation data files | 
| WriteTimeOutput | Write a 'timeXXXX.txt' file | 
| WriteXobs | Write an 'Xobs.txt' File |