Read Data from Relational Database Management Systems and Health Information Systems

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Documentation for package ‘readepi’ version 1.0.1

• DESCRIPTION file.
• User guides, package vignettes and other documentation.
• Package NEWS.

Help Pages

dhis2_login	Establish connection to a DHIS2 instance
get_api_version	Get DHIS2 API version
get_data_elements	Get all data elements from a specific DHIS2 instance
get_organisation_units	Get the organization units from a specific DHIS2 instance
get_programs	get all programs from a given specific DHIS2 instance
get_program_org_units	Get organisation units that are associated with a given program
get_program_stages	Get program stages for one or more DHSI2 programs
get_tracked_entities	Get tracked entity attributes, their corresponding IDs and event IDs
login	Establish a connection to the HIS of interest.
lookup_table	Lookup table
read_dhis2	Import data from DHIS2
read_rdbms	Import data from relational database management systems (RDBMS).
read_sormas	Import data from SORMAS
request_parameters	Request parameters
show_tables	Display the list of tables in a database
sormas_get_api_specification	Download the API specification file from SORMAS
sormas_get_data_dictionary	Download SORMAS data dictionary
sormas_get_diseases	Get the list of disease names from a SORMAS instance