omopgenerics: Methods and Classes for the OMOP Common Data Model

Provides definitions of core classes and methods used by analytic pipelines that query the OMOP (Observational Medical Outcomes Partnership) common data model.

Version: 1.3.2
Depends: R (≥ 4.1)
Imports: cli, dbplyr (≥ 2.5.1), dplyr, generics, glue, lifecycle, methods, purrr, rlang, snakecase, stringi, stringr, tidyr, vctrs
Suggests: bit64, CDMConnector, covr, duckdb, gt, here, jsonlite, knitr, omock, readr, rmarkdown, testthat (≥ 3.0.0), withr
Published: 2025-10-13
DOI: 10.32614/CRAN.package.omopgenerics
Author: Martí Català ORCID iD [aut, cre], Edward Burn ORCID iD [aut], Mike Du ORCID iD [ctb], Yuchen Guo ORCID iD [ctb], Adam Black ORCID iD [ctb], Marta Alcalde-Herraiz ORCID iD [ctb]
Maintainer: Martí Català <marti.catalasabate at ndorms.ox.ac.uk>
BugReports: https://github.com/darwin-eu/omopgenerics/issues
License: Apache License (≥ 2)
URL: https://darwin-eu.github.io/omopgenerics/
NeedsCompilation: no
Materials: README, NEWS
CRAN checks: omopgenerics results

Documentation:

Reference manual: omopgenerics.html , omopgenerics.pdf
Vignettes: cdm_reference (source, R code)
concept_set (source, R code)
cohort_table (source, R code)
expanding_omopgenerics (source, R code)
logging (source, R code)
reexport (source, R code)
summarised_result (source, R code)
suppression (source, R code)

Downloads:

Package source: omopgenerics_1.3.2.tar.gz
Windows binaries: r-devel: omopgenerics_1.3.2.zip, r-release: omopgenerics_1.3.2.zip, r-oldrel: omopgenerics_1.3.2.zip
macOS binaries: r-release (arm64): omopgenerics_1.3.2.tgz, r-oldrel (arm64): omopgenerics_1.3.2.tgz, r-release (x86_64): omopgenerics_1.3.2.tgz, r-oldrel (x86_64): omopgenerics_1.3.0.tgz
Old sources: omopgenerics archive

Reverse dependencies:

Reverse imports: CDMConnector, CodelistGenerator, CohortCharacteristics, CohortConstructor, CohortSurvival, CohortSymmetry, DrugExposureDiagnostics, DrugUtilisation, IncidencePrevalence, MeasurementDiagnostics, omock, OmopConstructor, OmopOnSpark, OmopSketch, OmopViewer, PatientProfiles, PhenotypeR, TestGenerator, visOmopResults

Linking:

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