bsub: Submitter and Monitor of the 'LSF Cluster'
It submits R code/R scripts/shell commands to 'LSF cluster' (<https://en.wikipedia.org/wiki/Platform_LSF>, the 'bsub' system) without leaving R. There is also an interactive 'shiny' application for monitoring job status.
| Version: | 2.0.6 |
| Depends: | R (≥ 4.0.0) |
| Imports: | GlobalOptions (≥ 0.1.1), GetoptLong (≥ 0.1.8), digest, utils, stats, clisymbols, crayon, grDevices, graphics, codetools, ssh, igraph |
| Suggests: | knitr, DT (≥ 0.13), shiny (≥ 1.0.0), shinyjs, graph, ggplot2, rmarkdown, markdown, DiagrammeR |
| Published: | 2025-11-28 |
| DOI: | 10.32614/CRAN.package.bsub |
| Author: | Zuguang Gu  [aut,
cre] |
| Maintainer: | Zuguang Gu <z.gu at dkfz.de> |
| License: | MIT + file LICENSE |
| URL: | https://github.com/jokergoo/bsub |
| NeedsCompilation: | no |
| SystemRequirements: | Platform LSF, bsub |
| Materials: | NEWS |
| CRAN checks: | bsub results |
Documentation:
| Reference manual: | bsub.html , bsub.pdf |
| Vignettes: |
Send R code/R scripts/shell commands to LSF cluster (source) |
Downloads:
| Package source: | bsub_2.0.6.tar.gz |
| Windows binaries: | r-devel: bsub_1.1.0.zip, r-release: bsub_1.1.0.zip, r-oldrel: bsub_1.1.0.zip |
| macOS binaries: | r-release (arm64): bsub_1.1.0.tgz, r-oldrel (arm64): bsub_1.1.0.tgz, r-release (x86_64): bsub_2.0.6.tgz, r-oldrel (x86_64): bsub_2.0.6.tgz |
| Old sources: | bsub archive |
Linking:
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