adjustedCurves 0.9.0
- This is the first release of this package
adjustedCurves 0.9.1
- Include CRAN in installation instructions
- Updated code and tests to run with updated versions of the mice and ggplot2 packages
- Updated documentation of package man page to include features not supported at the moment
adjustedCurves 0.10.0
- Removed support for tmle, ostmle methods
- Changed citation information because manuscript was published
- Changed
print
method to be equal to summary
method
- Fixed issues with unit-tests that require packages under “Suggests” only
adjustedCurves 0.10.1
- Fixed small issues in unit tests caused by changes in the
WeightIt
package
- Made some small documentation updates
adjustedCurves 0.11.0
Enhancements
- Added arguments
iso_reg
and force_bounds
to adjustedsurv()
and adjustedcif()
functions to allow applying correction techniques outside plotting as well
- Added better support for multiple imputation when
variable
, ev_time
or event
contain missings, includes the new mi_extrapolation
argument in adjustedsurv()
and adjustedcif()
- Added the
ratio
argument to adjusted_rmst()
and adjusted_rmtl()
functions
- Added support for multiple
to
values in adjusted_rmst()
and adjusted_rmtl()
, which speeds up plot_rmst_curve()
and plot_rmtl_curve()
considerably
Bug Fixes
- There was a small bug in internal functions used to calculate integrals, which lead to slightly incorrect results whenever a survival curve reached 0 (or a CIF reached 1) and the “to” value was greater than the last observed time point. This may have impacted standard error estimates in
adjusted_rmst()
, adjusted_rmtl()
and output of adjusted_curve_test()
and functions that rely on those functions. This is fixed now, but may lead to slightly different estimates than in previous versions.
New Features
- Added the new methods
surv_tmle
and cif_tmle
, based on the concrete
package
- Added new instrumental variable based method
surv_iv_2SRIF
- Added new methods
surv_prox_iptw
, surv_prox_aiptw
based on code from Andrew Ying
- Added the
adjusted_curve_ratio()
function
- Added the
plot_curve_ratio()
function
Documentation
- Changed examples for the usage of
WeightIt
as suggested by Noah Greifer
- Added a new vignette with an overview of implemented features of each method
- Small changes to formulations
adjustedCurves 0.11.1
Enhancements
- Re-factored internal code to vastly increase speed of bootstrapping related computations
New features
- Added risk table functionality for
plot.adjustedsurv()
(all arguments starting with risk_table
)
- Allow estimation of difference and ratios in
plot_rmst_curve()
function
- Allow estimation of difference and ratios in
plot_rmtl_curve()
function
- Allow estimation of difference and ratios in
adjusted_surv_quantile()
function
Refactored
- Re-factored examples to only be executed if suggested packages are installed
- Renamed
adjsurv
and adjcif
output objects of adjustedsurv()
and adjsutedcif()
respectively to adj
- Put functionality of
difference
and ratio
arguments into one contrast
argument in adjusted_rmst()
, adjusted_rmtl()
, adjusted_surv_quantile()
, plot_rmst_curve()
and plot_rmtl_curve()
functions
- Temporarily removed support for
tmle
in adjustedsurv()
and adjustedcif()
due to concrete
being removed from CRAN
Documentation
- Re-worked introduction vignette
- Added FAQ vignette
- Added Group Comparison vignette