Imports: ggnetwork (>= 0.5.1), igraph (>= 1.1.2)

Imports: Rcpp (>= 0.11.0), adephylo, igraph, ape, phylobase, boot, DBI,
graphics, grDevices, methods, stats, utils

Imports: igraph, methods, NHPoisson, phylobase

Imports: ape, ggplot2, reshape2, Rfast, RSpectra, stats, utils

Depends: R (>= 3.1)
Imports: stats, ape, Rcpp, Matrix, methods, graphics, dplyr, lme4,
nloptr, gridExtra, mvtnorm, latticeExtra, tidyr
LinkingTo: Rcpp, RcppArmadillo
Suggests: testthat, pez, knitr, rmarkdown, covr, picante, rbenchmark,
INLA, MCMCglmm, logistf, phylolm, ggplot2, ggridges, DHARMa,
rr2

Depends: R (>= 2.10)
Suggests: RSQLite, DBI, data.table, e1071, keras, randomForest,
reticulate, rms

Suggests: childsds, dplyr, ggplot2, lintr, magrittr, rmarkdown,
testthat, knitr, spelling, tidyr, utils

Imports: bestNormalize, dplyr, dynamicTreeCut, ggplot2, Metrics,
RcppML, stats, tidyr

Depends: R (>= 3.5.0), ape (>= 5.7), maps
Imports: clusterGeneration, coda, combinat, DEoptim, doParallel, expm,
foreach, graphics, grDevices, MASS, methods, mnormt, nlme,
numDeriv, optimParallel, parallel, phangorn (>= 2.3.1),
scatterplot3d, stats, utils
Suggests: animation, geiger, plotrix, RColorBrewer, rgl

Depends: R (>= 4.0)
Imports: stats, utils, gpindex (>= 0.5.0), Matrix (>= 1.5-0)
Suggests: rmarkdown, knitr, sps, testthat (>= 3.0.0)

Suggests: brglm, circular, corpcor, quantreg

Depends: R (>= 3.5.0), coda, MCMCpack, survival

Imports: shiny, base64enc, stringr, htmltools, testthat

Imports: stats
Suggests: rmarkdown, knitr, testthat (>= 3.0.0), dplyr

Imports: ggplot2, stats, png, FrF2, DoE.base, FrF2.catlg128
Suggests: MASS

Imports: cli, glue, rlang (>= 0.4.2), stringi, stringr

Depends: R (>= 2.10)
Imports: grid, gridGeometry, grImport2, grDevices, purrr, jpeg, png,
R6, rlang, stringr, tibble, tools, utils
Suggests: animation (>= 2.7), ggplot2, gifski, gridpattern, magick,
pdftools, rayrender (>= 0.28.8), rayvertex (>= 0.10.4), readobj
(>= 0.4.0), rgl (>= 0.106.8), scales (>= 0.5.0), systemfonts,
testthat, tweenr, vdiffr, xmpdf (>= 0.1.1), XML (>= 3.99-0.9)