Depends: R (>= 4.1.0)
Imports: dplR (>= 1.7.2), igraph, stringr, reshape2, RCy3, dplyr,
RColorBrewer, tidyr, foreach, lifecycle, doParallel, stats,
grDevices
Suggests: knitr, rmarkdown, testthat (>= 3.0.0), DiagrammeR

Imports: stats, utils, gridExtra, methods

Suggests: knitr, RColorBrewer, gplots, seriation, gapmap, rmarkdown

Suggests: covr, knitr, rmarkdown, testthat (>= 3.0.0), xml2, deSolve,
DiagrammeR

Imports: irlba, Matrix, FactoMineR, stats

Imports: dplyr (>= 0.3), reshape2 (>= 1.4)

Imports: methods, parallel, MASS, Matrix, mvtnorm

Depends: R (>= 3.5.0)
Imports: MASS, nlme, Rcpp, methods, rstan, rstantools
LinkingTo: BH, Rcpp, RcppArmadillo, RcppEigen, RcppParallel,
StanHeaders, rstan

Imports: stats, utils, changepoint (>= 2.2.2)
Suggests: pbapply, mgcv, knitr, rmarkdown, testthat

Depends: R (>= 4.1)
Imports: cli, dplyr, ggdensity, isoband, purrr, rlang, sf, sfheaders,
tibble, vctrs
Suggests: forcats, ggplot2, knitr, ragg, readr, rmarkdown, stringr,
testthat (>= 3.0.0), tidyr

Imports: FNN, ggplot2, ggrepel, grDevices, gridExtra, RColorBrewer,
Rtsne

Imports: utils
Suggests: graphics, knitr, mvtnorm, rmarkdown, stats, testthat

Depends: R (>= 3.5)
Suggests: data.table, testthat, usethis, devtools, roxygen2, jsonlite,
ggplot2, cowplot, directlabels, rmarkdown, knitr

Suggests: foreach, iterators, colorspace, lattice, parallelly

Suggests: covr (>= 3.1.0), spelling, survival, testthat (>= 3.0.0),
withr

Depends: R (>= 4.0.0), nnet, MASS, Rsolnp, nlme

Imports: raster, methods, sp, sf, terra, utils, grDevices, xml2,
jsonlite

Depends: R (>= 3.0.0), ggplot2, Rcpp (>= 0.11.2), rrcov, methods, MASS,
np
Imports: lattice, sm, geometry, colorspace, zoo, grDevices
LinkingTo: Rcpp, RcppArmadillo
Suggests: mvtnorm, rgl, sn, robustbase, dplyr, RcppArmadillo, xts,
covr, testthat, fda, lintr, roxygen2, pkgbuild

Depends: R (>= 3.0.0)
Imports: graphics, stats, grDevices, mnormt
Suggests: markdown, knitr, rmarkdown, ggplot2, dplyr, tidyr, pander,
bookdown

Suggests: callr, covr, gh, spelling, testthat, whoami, withr

Imports: xtable, utils, grDevices, graphics, stats