Imports: ks, mvtnorm, parallel, stats, MASS, methods

Depends: R (>= 3.3)
Imports: ggplot2 (>= 3.3), lubridate, reshape2, reticulate, scales,
terra
Suggests: magick, contoureR, testthat (>= 3.0.0), raster, openair

Depends: R (>= 3.5.0)
Imports: methods, graphics, grDevices, stats, utils, magrittr
Suggests: digest, ggplot2, knitr, rmarkdown, testthat, glmnet, mvtnorm

Depends: R (>= 3.0.0), lpSolve, pcaPP, igraph
Suggests: parallel

Depends: R (>= 3.4), arrangements, matrixStats, igraph, graphics,
grDevices
Imports: pracma

Depends: R (>= 3.2.0)
Imports: rstudioapi, utils, tools, sos, stringi, yaml, crayon, cli,
rematch2
Suggests: rcmdcheck, git2r, shiny, miniUI, withr, usethis, fs, details,
roxygen2, testthat, knitr, rmarkdown

Depends: R (>= 2.10)
Imports: stats, CholWishart, MASS, withr
Suggests: knitr, rmarkdown, bookdown, lme4, lmerTest, testthat (>=
2.1.0)

Imports: stats, purrr, magrittr, dplyr, tidyr, rlang, tidyselect, utils
Suggests: spelling, shiny, shinytest, stringr, rvest, xml2, ggplot2,
purrrlyr, testthat, markdown, knitr, rmarkdown, cleanrmd,
Kendall, kableExtra, covr, readxl, glue, janitor, rclipboard

Imports: methods, Matrix, splines, ggplot2, reshape2
Suggests: knitr, rmarkdown, testthat, SummarizedExperiment,
SingleCellExperiment, SeuratObject, cowplot, wrswoR,
sparseMatrixStats, ComplexHeatmap, patchwork

Depends: R (>= 3.5.0)
Imports: stats, lamW, mathjaxr, sandwich, doParallel, foreach, parallel
Suggests: rmarkdown, knitr, tinytest, covr, VGAM

Depends: R (>= 3.5)
Imports: stats, shiny, shinycssloaders, shinyjs

Imports: cli, graphics, grDevices, png, purrr, rstudioapi, tibble,
utils
Suggests: convey, dplyr, httr, magrittr, projmgr, RCurl, readr, readxl,
srvyr, survey, timeDate

Imports: stats, ape, Rcpp, rstackdeque, lifecycle
LinkingTo: Rcpp,
Suggests: testthat, knitr, rmarkdown, markdown

Depends: R (>= 3.5.0)
Imports: HTSSIP, dplyr, lazyeval, phyloseq, plyr, stringr, tibble,
tidyr, magrittr, ggplot2, ggpubr, purrr, rlang, MASS, DESeq2,
data.table, utils
Suggests: rmarkdown, knitr, EBImage, readr, BiocManager