Depends: ape, DESeq2, ggplot2
Imports: ggrepel, pheatmap, lookup, plyr, data.table, rafalib,
RColorBrewer, methods, graphics

Depends: R (>= 3.0.2)
Imports: graphics, stats, car, colorspace, fda, splines, grDevices

Imports: stats, utils, httr (>= 1.2.0), jsonlite (>= 1.1), magrittr,
yaml
Suggests: testthat, knitr, ssh (>= 0.6), aws.s3, arrow

Imports: mgcv, MASS, stats, graphics, grid, brglm, princurve (>=
2.0.2), lattice

Imports: Hmisc, ggplot2, plotly, stats, caret, htmltools, DT, magrittr,
RANN
Suggests: knitr, rmarkdown

Imports: ggplot2, gridExtra, dplyr, grid
Suggests: data.table, testthat, tidyr, reshape2, rmarkdown, MASS,
shiny, nnet, knitr

Depends: R (>= 3.50)
Imports: dplyr, ggplot2, ggpubr, magrittr, patchwork, png, purrr,
rlang, Seurat, stringr, utils,
Suggests: covr, knitr, rmarkdown, Signac, testthat (>= 3.0.0)

Imports: svd(>= 0.3.3-2), parallel(>= 3.2.1), grDevices, graphics,
stats, utils

Imports: glmnet (>= 1.4), selectiveInference (>= 1.0.0), mgcv (>= 1.0)

Suggests: covr, knitr, mockery, stringi, testthat (>= 3.0.0), withr

Suggests: knitr, rmarkdown, robustbase, mclust

Depends: dplyr
Imports: RSQLite, DBI, zip, methods, dbplyr, tidyselect, cli, rlang,
pillar, hms
Suggests: testthat, stringr, knitr, rmarkdown, tibble, rJava,
rcmdcheck, arrow

Depends: R (>= 3.5.0)
Imports: signal, tidyr, ggplot2, cowplot, rlang, utils, plyr
Suggests: extrafont, dplyr, knitr, rmarkdown, testthat, MASS

Imports: nabor, ncdf4, proj4, sp, spbabel

Imports: animation
Suggests: maps, knitr, mapdata, testthat, rmarkdown

Depends: R (>= 3.3.0), shiny, sp, sf
Imports: MCMCpack, ellipse, mvtnorm, deldir, colorspace, Matrix, MASS,
png, grDevices, bezier, HDInterval, plyr, stats, methods,
utils, ggplot2, rlang

Imports: stats, igraph (>= 1.2.4.1), ggplot2 (>= 3.2.0)

Imports: R6, httpuv, base64enc, jsonlite, glue, R.utils
Suggests: rmarkdown, knitr, shiny, htmltools, pryr, V8, servr

Imports: dplyr, gganimate, ggplot2, plotly, purrr, RColorBrewer, rlang,
stats, tibble, tidyr, tidyselect

Depends: R (>= 3.5.0)
Imports: servr, digest, RJSONIO, grid, gtable (>= 0.1.1), MASS, plyr
(>= 1.7.1), reshape2, scales (>= 0.4.1), stats, knitr (>=
1.5.33), data.table (>= 1.9.8), methods
Suggests: gert, gitcreds, gh, sp, gistr (>= 0.2), shiny, RColorBrewer,
htmltools, rmarkdown, testthat, devtools, httr, maps,
ggplot2movies, hexbin, Hmisc, lattice, mapproj, mgcv, nlme,
rpart, svglite, ggplot2