Imports: ape, beautier (>= 2.6.11), phangorn, rappdirs, readr, rJava,
rlang (>= 1.1.0), sessioninfo, stringr, tibble, xml2
Suggests: knitr, rmarkdown, spelling, testthat (>= 2.1.0), tracerer (>=
2.2.3)

Depends: R (>= 2.10)
Imports: cli, cobalt, dplyr, generics, ggplot2, purrr, rlang, stringr,
distributional, tidyr, ggdist, mixtools
Suggests: knitr, rmarkdown, spelling, testthat (>= 3.0.0), tibble

Imports: ape, rappdirs, purrr, rlang (>= 1.1.0), seqinr, stringr
Suggests: knitr, markdown, readr, rmarkdown, testthat (>= 2.1.0)

Depends: R (>= 3.6), neo2R (>= 2.4.1), visNetwork
Imports: dplyr, readr, stringr, utils, shiny (>= 0.13), DT, miniUI (>=
0.1.1), rstudioapi (>= 0.5)
Suggests: knitr, rmarkdown, biomaRt, GEOquery, base64enc, htmltools,
webshot2, RCurl

Depends: R (>= 3.0)
Imports: testthat (>= 0.7.1), VennDiagram (>= 1.6.4), data.table (>=
1.8.11), R.utils (>= 2.0.2), yaml (>= 2.1.10), parallel, grid
Suggests: knitr (>= 1.4), rmarkdown (>= 0.9.5)

Depends: R (>= 2.10)
Imports: circlize, CoordinateCleaner, cowplot, dplyr, forcats, ggplot2,
ggspatial, here, igraph, lubridate, mgsub, openxlsx, paletteer,
readr, rnaturalearth, sf, stringr, tidyselect
Suggests: bdc, BiocManager, classInt, ComplexHeatmap, countrycode,
devtools, emld, formatR, galah, hexbin, htmltools, htmlwidgets,
httr, janitor, knitr, leaflet, magrittr, pkgdown, plotly,
prettydoc, purrr, R.utils, renv, rgnparser, rlang, rmarkdown,
rmdformats, rnaturalearthdata, rvest, taxadb, terra, testthat,
tidyr, utils, xml2

Depends: R (>= 2.10)
Imports: dplyr, lifecycle, sandwich, stats
Suggests: knitr, rmarkdown, testthat (>= 3.0.0), tidyr,
marginaleffects, margins, RobinCar (== 0.3.0)

Imports: methods, Rcpp (>= 0.12.0), RcppParallel (>= 5.0.1), rstan (>=
2.26.0), rstantools (>= 2.1.1), data.table, tidyr, ggplot2,
cowplot, dplyr, magrittr, utils, gridExtra, odeGUTS

Imports: stats, graphics, grDevices, utils

Depends: R (>= 2.5)
Imports: nlsr, nlstools, nls2, ggplot2, reshape2, stats, optimx
Suggests: openxlsx, knitr, dplyr, tidyr, tidyverse, rmarkdown