Genome-wide association study (GWAS) performed with SLOPE,
    short for Sorted L-One Penalized Estimation, a
    method for estimating the vector of coefficients in a linear model.
    In the first step of GWAS, single nucleotide polymorphisms (SNPs) are 
    clumped according to their correlations and distances. 
    Then, SLOPE is performed on the data where each clump has
    one representative.
    Malgorzata Bogdan, Ewout van den Berg, Chiara Sabatti, Weijie Su 
    and Emmanuel Candes (2014) 
    "SLOPE - Adaptive Variable Selection via Convex Optimization" 
    <arXiv:1407.3824>.

Command-line and 'shiny' GUI implementation of the GenEst models for estimating bird and bat mortality at wind and solar power facilities, following Dalthorp, et al. (2018) <doi:10.3133/tm7A2>.

Access data on plant genetic resources from genebanks around the world published on Genesys (<https://www.genesys-pgr.org>).
  Your use of data is subject to terms and conditions available at <https://www.genesys-pgr.org/content/legal/terms>.

Data from multi environment agronomic trials, which are often 
  carried out by plant breeders, can be analyzed with the tools offered by this 
  package such as the Additive Main effects and Multiplicative Interaction model 
  or 'AMMI' ('Gauch' 1992, ISBN:9780444892409) 
  and the Site Regression model or 'SREG' ('Cornelius' 1996, 
  <doi:10.1201/9780367802226>). Since these methods present a poor performance 
  under the presence of outliers and missing values, this package includes 
  robust versions of the 'AMMI' model ('Rodrigues' 2016, 
  <doi:10.1093/bioinformatics/btv533>), and also imputation techniques 
  specifically developed for this kind of data ('Arciniegas-Alarcón' 2014, 
  <doi:10.2478/bile-2014-0006>).

Classes and methods for handling genetic data. Includes
        classes to represent genotypes and haplotypes at single markers
        up to multiple markers on multiple chromosomes. Function
        include allele frequencies, flagging homo/heterozygotes,
        flagging carriers of certain alleles, estimating and testing
        for Hardy-Weinberg disequilibrium, estimating and testing for
        linkage disequilibrium, ...