Last updated on 2025-07-05 10:49:27 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.3 | 13.96 | 194.30 | 208.26 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.18 | 243.84 | 254.02 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 335.99 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 392.69 | OK | |||
| r-devel-windows-x86_64 | 1.1.3 | 19.00 | 159.00 | 178.00 | OK | |
| r-patched-linux-x86_64 | 1.1.3 | 15.52 | 236.32 | 251.84 | OK | |
| r-release-linux-x86_64 | 1.1.3 | 14.35 | 218.61 | 232.96 | OK | |
| r-release-macos-arm64 | 1.0.5 | 41.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 180.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 19.00 | 183.00 | 202.00 | OK | |
| r-oldrel-macos-arm64 | 1.0.5 | 36.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 160.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 20.00 | 226.00 | 246.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [80s/127s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.458, system: 0.037, elapsed: 1.933 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.065, system: 0.125, elapsed: 11.978 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.014, elapsed: 0.226 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.680, system: 0.182, elapsed: 4.749 seconds]
Computing values for grid cells...
... done. [user: 0.163, system: 0.003, elapsed: 0.268 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.095, system: 0.380, elapsed: 19.951 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.485, system: 0.034, elapsed: 2.152 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.088, system: 0.088, elapsed: 12.883 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.191, system: 0.012, elapsed: 0.285 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.833, system: 0.170, elapsed: 6.183 seconds]
Computing values for grid cells...
... done. [user: 0.160, system: 0.004, elapsed: 0.265 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.312, system: 0.328, elapsed: 22.588 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.533, system: 0.030, elapsed: 2.595 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.109, system: 0.081, elapsed: 16.041 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.011, elapsed: 0.287 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.728, system: 0.190, elapsed: 6.077 seconds]
Computing values for grid cells...
... done. [user: 0.161, system: 0.004, elapsed: 0.280 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.187, system: 0.222, elapsed: 1.297 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.536, system: 0.558, elapsed: 27.668 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.471, system: 0.033, elapsed: 3.994 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.049, system: 0.069, elapsed: 23.144 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.191, system: 0.012, elapsed: 0.465 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.827, system: 0.184, elapsed: 6.394 seconds]
Computing values for grid cells...
... done. [user: 0.166, system: 0.003, elapsed: 0.281 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.397, system: 0.466, elapsed: 15.185 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.745, system: 0.801, elapsed: 50.770 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [78s/107s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.525, system: 0.051, elapsed: 1.812 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.493, system: 0.057, elapsed: 8.960 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.176, system: 0.013, elapsed: 0.189 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.306, system: 0.156, elapsed: 3.768 seconds]
Computing values for grid cells...
... done. [user: 0.158, system: 0.004, elapsed: 0.212 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.161, system: 0.298, elapsed: 16.199 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.580, system: 0.043, elapsed: 2.294 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.207, system: 0.083, elapsed: 15.368 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.193, system: 0.013, elapsed: 0.364 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.618, system: 0.172, elapsed: 6.623 seconds]
Computing values for grid cells...
... done. [user: 0.156, system: 0.003, elapsed: 0.296 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.295, system: 0.333, elapsed: 25.719 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.578, system: 0.035, elapsed: 2.592 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.976, system: 0.046, elapsed: 14.162 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.181, system: 0.011, elapsed: 0.263 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.483, system: 0.161, elapsed: 5.134 seconds]
Computing values for grid cells...
... done. [user: 0.169, system: 0.003, elapsed: 0.238 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.080, system: 0.261, elapsed: 0.980 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.086, system: 0.540, elapsed: 24.397 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.479, system: 0.031, elapsed: 2.147 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.050, system: 0.069, elapsed: 12.843 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.184, system: 0.011, elapsed: 0.243 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.595, system: 0.211, elapsed: 4.616 seconds]
Computing values for grid cells...
... done. [user: 0.177, system: 0.009, elapsed: 0.252 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.287, system: 0.588, elapsed: 13.620 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.417, system: 0.956, elapsed: 34.643 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64