f037f33893533f15a630ad8bc1de640a *DESCRIPTION
dd7b4ebe4f8e11307239334fda051e3e *LICENSE.note
28aa22f5b4b9ec648ab68639365ee3b3 *NAMESPACE
b67deefcfe141ddfcb74b756ea6875b0 *NEWS.md
df6cc46bc7fae1a55b713f3d5065b35a *R/Pv3Rs-package.R
267a59cd85a266cdf960961326bd6005 *R/RG_inference.R
c32d12c68723140d444cab3472c2495d *R/RG_to_igraph.R
611afd38fa1742fe729697655a872c44 *R/compute_posterior.R
1fa4e704e3f549ce7d2ad649d018e42f *R/data.R
6486ea24e966152a5b335d7a22edc769 *R/determine_MOIs.R
efb0fa133c7d30a8c85447dba03c2389 *R/enumerate_CPs.R
b3b6ce03eb120d942f5505c37a1da47c *R/enumerate_IPs_RG.R
327a0cf8bc56caf048078d0e228eef61 *R/enumerate_RGs.R
4b3b4d6c6a74b0788783f1f9c5a80743 *R/enumerate_alleles.R
6042dc67a5782bf461aee98ef0e32468 *R/helpers.R
5e07e27c3577ece1f14b9e7aa36aba0f *R/msg_progress_bar.R
52139d8e9ba55ba921c877ce2e71e53b *R/plot_RG.R
f226f6a08090d2da33b93a57e0c90eac *R/plot_data.R
504fb84302069f0bfb48b56eaa573a4a *R/plot_simplex.R
5f05d36ab14d148335db79277fa53e54 *R/recombine_parent_ids.R
16945345071bead0df8c29d551954418 *R/sample_RG.R
11d30c6c93c171a8f33292af35b4b377 *README.md
a917295dc228fa8a4303596c8544383b *build/partial.rdb
bbd7b775a4c76397e0eb3d76a59436ff *build/vignette.rds
a64d1cd00747e4f6a45199bf42e11c5a *data/fs_VHX_BPD.rda
cd394f8561f4e1abe0b22b691e192d7a *data/ys_VHX_BPD.rda
3dd85ee2b6b2139e993fd8ac67721832 *inst/doc/demonstrate-usage.R
ad1b26f59bd2cc437df1eed288780ecc *inst/doc/demonstrate-usage.Rmd
c2af6d890486b59233c9874398f6c64a *inst/doc/demonstrate-usage.html
cef6b2f4d4cd89e0e8366184103d7039 *man/Pv3Rs-package.Rd
a148c2e9f9275259ec416b7f5fc66a1d *man/RG_to_igraph.Rd
b1d426f77243504004b3b85ef94a291b *man/compute_posterior.Rd
ed40f0131ab687373e62375801e245e7 *man/determine_MOIs.Rd
da7f9f89cd63d22bf59800d9ce3a8029 *man/enumerate_RGs.Rd
cade97b9962db8e80808a939ca3bcd48 *man/figures/logo.png
2391883f5e19a96d68f6cb91028473f8 *man/fs_VHX_BPD.Rd
049a75d583944ddcde9bd063a54d90df *man/macros/macros.Rd
84bd4bbf039290e358543c6eb2475f2a *man/plot_RG.Rd
7b908cca92d0133bbac32fa68d47c0eb *man/plot_data.Rd
abcfc16b2c4be9b72d9267c8daa57972 *man/plot_simplex.Rd
98ef4350f3aa8681fa71001f617f7ae6 *man/project2D.Rd
0d32da7c734f735d0e70c0fb746feb05 *man/sample_RG.Rd
84558484d61de3cea0fb82cc847d8747 *man/ys_VHX_BPD.Rd
532ef249c74e9acaeb621574b398c164 *tests/testthat.R
5a0f02778f6f0322eaa0f262a6a8fccf *tests/testthat/test-compute_posterior.R
ad1b26f59bd2cc437df1eed288780ecc *vignettes/demonstrate-usage.Rmd
