Association Tests for Microbial Lineages on a Taxonomic Tree
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Documentation for package ‘miLineage’ version 2.1
Help Pages
| miLineage-package | Association Tests for Microbial Lineages on a Taxonomic Tree |
| data.real | Real data that include an OTU table, a taxonomy table, and a covariate table |
| data.toy | Simulated data that include an OTU table, a taxonomy table, and a covariate table |
| miLineage | Association Tests for Microbial Lineages on a Taxonomic Tree |
| QCAT | Quasi-Conditional Association Test (QCAT) |
| QCAT_GEE | QCAT+GEE Two-Part Test |
| ZIGDM | Zero-Inflated Generalized Dirichlet Multinomial (ZIGDM) Tests |