| afmAdhesionEnergy | Adhesion Energy |
| afmBaselineCorrection | Performs a baseline correction to an AFM F-z curve |
| afmContactPoint | Contact point |
| afmdata | AFM data |
| afmDetachPoint | Detach point |
| afmExpDecay | Exponential decay fit |
| afmexperiment | AFM experiment |
| afmExtract | Extract computed parameters from an afmexperiment |
| afmIndentation | afmIndentation |
| afmReadJPK | Read Nanowizard JPK ascii file |
| afmReadJPKFolder | Read all Nanowizard JPK ascii files in a folder |
| afmReadVeeco | Read Bruke Nanoscope Veeco ascii file |
| afmReadVeecoFolder | Read all Bruke Nanoscope Veeco ascii files in a folder |
| afmYoungModulus | afmYoungModulus |
| afmZeroPointSlope | Zero Force Point and Slope |
| append.afmdata | Append to an 'afmdata' list. |
| batchExperiment | Example of an afmexperiment data class. |
| is.afmdata | Afmdata check. |
| is.afmexperiment | Afmexperiment check. |
| plot.afmdata | Plot an afmdata object |
| summary.afmdata | Summary of an 'afmdata' class object. |
| windowedFit | Linear fit in a running window |