Estimating Plant Pathogen Epidemiology Parameters from
Laboratory Assays
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Documentation for package ‘EpiPvr’ version 0.0.1
Help Pages
| AP_assay_simulator | Main function for AP assay simulation |
| ap_data_sim_PT | Simulated access period experiment Data for a hypothetical PT virus |
| ap_data_sim_SPT | Simulated access period experiment Data for a hypothetical SPT virus |
| calculate_epidemic_probability | Main function for calculating epidemic probability |
| estimate_virus_parameters_PT | Estimate PT virus parameters using Bayesian inference with rstan |
| estimate_virus_parameters_SPT | Estimate SPT virus parameters using Bayesian inference with rstan |