| Best.Index | Jack-knife indices in a single topology m times and evaluates a success rule. |
| Calculate.Index | Indices values and Jack-knife indices for a single topology. |
| Children | Children of a node. |
| distribution | Distribution of five taxa. |
| IndexI | I index value for a single topology. |
| IndexW | W index value for a single topology. |
| Multi.Index.Calc | Jack-knife indices in n topologies one time. |
| Multi.Jack | Jack-knife indices in n topologies m times. |
| Multitaxon1 | Multitaxon example. |
| Rank.Indices | Rank indices. |
| Read.Data | Read distributions. |
| Sum.Indices.2.Topologies | Sums two tables with indices values. |
| taxon1 | A tree and the distribution of the taxa. |
| tree | A tree with five terminals. |